- Admixture Mapping (Capitalizing on admixture in genome-wide association studies)
- Bayesian Linear Regression (BLR)
- BGLR (A Statistical Package for Whole-Genome Regression)
- BhGLM (Bayesian hierarchical GLMs and survival models, with application to Genetics and Epidemiology)
- F-SKAT (SNP Set/Sequence Association Test for familial data with various types of traits)
- HapSeq
- Imputation Algorithm for Genetic Data
- NBZIMM (Negative Binomial and Zero-Inflated Mixed Models)
- PoolScreen
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