Driving Innovation for Rare Disorders: UAB C-PAM’s Collaboration on DLG4 Research

Hope For Harvey Foundation and UAB CPAM

The University of Alabama at Birmingham (UAB) Center for Precision Animal Modeling (C-PAM) is actively collaborating with the Hope for Harvey Foundation and DLG4 SHINE Foundation to develop a rat animal model for a DLG4 truncation variant. These two foundations focus on advancing research, translational medicine, treatment options, and early detection for DLG4-related disorders. Patients with variants in DLG4 experience a spectrum of symptoms, including severe cognitive disability, inability to speak, seizures, repetitive behaviors typical of children with an Autism Spectrum Disorder, and lack of motor control.

The UAB C-PAM team is generating a haploinsufficient rat model with a DLG4 truncating variant. The Hope for Harvey Foundation seeks to use this DLG4 model to test various gene therapy approaches for patients with the DLG4 mutations. The UAB C-PAM team also used AI tools, including mediKanren and the NCATS Biomedical Translator, to identify potential drug candidates. A curated list was shared with DLG4 SHINE and Hope for Harvey research teams. Trials with the medication guanfacine showed significant benefits in two patients, as highlighted in an interview with Dr. Joni Rutter of NCATS.

For more information about the Hope for Harvey Foundation and their mission, please visit Hope for Harvey.

C-PAM Drug Predictions for CAMSAP1 entering Drug Therapy Trials

Landon's League & UAB CPAM
Landon’s League Foundation and UAB C-PAM

Landon’s League Foundation is dedicated to supporting the development of treatments for rare pediatric genetic diseases and helping those affected by CAMSAP1-related disorder providing adaptive equipment to assist daily living activities. Landon and eight other children worldwide have been identified to share the same unnamed condition caused by inheriting two abnormal copies of the CAMSAP1 gene. This condition/disease causes several issues including seizures, microcephaly (small head size), global developmental delay, severe neurodevelopmental delay, and vision impairment.

The University of Alabama at Birmingham (UAB) Center for Precision Animal Modeling (C-PAM) is collaborating with the Landon’s League Foundation research team to generate a mouse model with an early truncation and find therapies that can be repurposed for treatment. While the mouse model is underway, C-PAM researchers shared drug predictions using artificial intelligence (AI) reasoning tools like mediKanren and NCATS Biomedical Translator, that have since been tested through a low-throughput drug screen in an existing CAMSAP-deficient worm model developed by Dr. Jana Marcette at Montana State University Billings. Three of the candidates were found to rescue the convulsion phenotype that was observed in the CAMSAP-mutant worms. As the Landon’s League research team continues its investigation into drug repurposing candidates, UAB C-PAM is working to generate a mouse model to further this research.

To read the full article and learn more about Landon’s League’s drug therapy trial breakthroughs, visit Landon’s League news.

From unknown diagnosis to new treatment, a UAB C-PAM discovers pathway towards new treatments for an ultra-rare myopathy

The journey from diagnosis to treatment can be long and arduous, especially for ultra-rare conditions. One such condition, X-linked Myopathy with Excessive Mitophagy (XMEA), has recently seen promising developments thanks to the pioneering efforts at the University of Alabama at Birmingham (UAB) within the UAB Center for Precision Animal Modeling (CPAM).

XMEA Family visiting the Alexander Lab
Alabama XMEA family visiting the Alexander Lab at UAB

The story begins with cousins who are affected by an undiagnosed myopathy, a disease that affects skeletal muscles. Their late grandfather suffered from a similar condition as does the younger cousin who is 4 years younger, and through family history and whole exome sequencing (WES) it was determine a pathogenic variant in the X-linked VMA21 gene, a known cause of X-linked Myopathy with Excessive Mitophagy (XMEA). XMEA is classified as an ultra-rare myopathy as of March 2024; 24 cases have been worldwide identified. No suitable animal model existed to identify treatments for their ultra rare myopathy. Dr. Michael Lopez of UAB Pediatric Neurology referred the cousins to UAB CPAM, whom accepted the case with the goal(s) of establishing new animal model(s) including patient-specific VMA21 versions of the XMEA disorder in zebrafish and mice, to promote research and identify new treatments.

Matthew Alexander, PhD
UAB/Children's of AL
Matthew Alexander, PhD
UAB/Children’s of AL
Michael Lopez, MD, PhD
Pediatric Neurologist
 MDA Clinic at
Children's of Alabama/UAB
Michael Lopez, MD, PhD
Pediatric Neurologist
MDA Clinic at
Children’s of Alabama/UAB
Jim Dowling, MD, PhD
SickKids/U. Toronto
Jim Dowling, MD, PhD
SickKids/U. Toronto

Given the lack of suitable animal models for XMEA, the UAB CPAM took on the challenge of creating patient-specific models in zebrafish and mice. As part of the outreach process, we contacted Dr. Jim Dowling (U. Toronto/SickKids Hospital) who had previously mentioned both an interest in XMEA and had begun to generate vma21 mutant zebrafish in parallel. Through a mutual collaboration, the lab of Matthew Alexander (UAB/CoA; CPAM DSS co-lead) began to characterize the vma21 mutant fish generated by the Dowling lab while generating the XMEA patient-specific Vma21 mutant zebrafish and mouse models.

Through extensive molecular and functional characterization, the CPAM team developed several new zebrafish zebrafish and a new patient-specific VMA21 knock-in (Vma21 KI) XMEA models. A targeted drug screening performed by the Alexander lab in the vma21 mutant (complete loss-of-function) zebrafish identified a class of autophagy inhibitors, including edaravone (Radicava®), an FDA-approved oxidative stress drug for amyotrophic lateral sclerosis (ALS). Short and long-term testing in the XMEA vma21 mutant fish showed improved muscle pathologies, improved functional outcomes, and extension of survival. The XMEA Vma21 KI mice have a milder pathology as this model variant more closely resembles the Alabama patient identified.

The long-term goal is to perform additional safety testing of these FDA-approved drug compounds in the Vma21 KI mice as verifying drug efficacy in two models of XMEA would demonstrate a new drug pathway and target, giving hope to both this Alabama family and others worldwide dealing with this devastating disorder. Demonstrating drug efficacy in both zebrafish and mouse models could pave the way for new treatments, offering hope to families affected by XMEA worldwide.

UAB Center for Precision Animal Modeling (CPAM)’s Work Highlighted in NIH’s ORIP Research Highlights

UAB Center for Precision Animal Modeling is pleased to share that our research has been featured in the NIH Office of Research Infrastructure Programs (ORIP) Research Highlights. This feature underscores the significant contributions our team at the Center for Precision Animal Modeling at the University of Alabama at Birmingham is making in the field of precision disease modeling.

The NIH ORIP supports a wide range of research-related resources and infrastructure, including the development of animal models for human diseases, cutting-edge scientific instrumentation, and the modernization of research facilities. To learn more about our research and its impact, please visit the NIH ORIP Research Highlights for UAB C-PAM.

We are honored to be recognized by ORIP and look forward to continuing our efforts to advance scientific knowledge and improve health outcomes.

Children’s of Alabama and UAB Medicine join new NORD Rare Disease Centers of Excellence network

Children’s of Alabama and UAB Medicine Join NORD Rare Disease Centers of Excellence Network

The National Organization for Rare Disorders has designated Children’s of Alabama and UAB Medicine as NORD Rare Disease Centers of Excellence. UAB Medicine and Children’s join 31 medical centers as part of the innovative network seeking to expand access, advance care and enhance research for rare diseases patients in the United States. 

“We are honored to receive a Rare Disease Centers of Excellence designation as recognition of UAB and Children’s continued commitment to provide cutting-edge treatment and research for much of the Southeast,” said Nathaniel Robin, M.D., professor and clinical director in the UAB Department of Genetics and professor of pediatrics in the UAB Marnix E. Heersink School of Medicine and at Children’s. “The collaborative network will allow us to serve our community and others across the nation while advancing the rare diseases field as a whole.”

According to the National Institutes of Health, any disease that affects fewer than 200,000 people in the United States is considered rare. There are 7,000 rare diseases, and 25 million to 30 million Americans are estimated to live with a rare disease. People living with rare diseases frequently face challenges finding diagnosis and quality clinical care. Additionally, more than 90 percent of rare diseases lack an approved treatment from the Food and Drug Administration. 

“Right now, far too many rare diseases are without an established standard of care. The Centers of Excellence program will help set that standard — for patients, clinicians and medical centers alike,” said Ed Neilan, chief scientific and medical officer of NORD. “We are proud to announce UAB Medicine and Children’s of Alabama as NORD Rare Disease Centers of Excellence and look forward to their many further contributions as we collectively seek to improve health equity, care and research to support all individuals with rare diseases.” 

To read the full article and learn more about this development, please visit the Children’s of Alabama and UAB Medicine Join NORD Rare Disease Centers of Excellence Network news.