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DeBreak is online in Nature Communications!

Posted on January 19, 2023January 19, 2023Categories paperLeave a comment

https://www.nature.com/articles/s41467-023-35996-1

Our work on gene fusion detection with long-read transcriptome data is accepted by Cancer Research.

Posted on October 14, 2022January 19, 2023Categories paper1 Comment

https://aacrjournals.org/cancerres/article/83/1/28/711845/Gene-Fusion-Detection-and-Characterization-in-Long

Nature Communications paper is online

Posted on August 25, 2022September 26, 2022Categories paperLeave a comment

Collaborating with Lewis Shi’s group, our paper is accepted in Nature Communications:

Selective suppression of melanoma lacking IFN-γ pathway by JAK inhibition depends on T cells and host TNF signaling

PloS Genetics paper is online

Posted on August 22, 2022September 26, 2022Categories paperLeave a comment

Collaborating with Dr. John Parant’s group, our paper is accepted in PloS Genetics:

Reduced sister chromatid cohesion acts as a tumor penetrance modifier

BMC Genomics paper is online

Posted on May 11, 2022September 26, 2022Categories paperLeave a comment

Our work on bacteria genome long-/hybrid- read de novo assembly is accepted:

B-assembler: a circular bacterial genome assembler

Genome Biology paper is online

Posted on November 14, 2021November 14, 2021Categories paperLeave a comment

Our work, “Accurate long-read de novo assembly evaluation with Inspector”, is online today in Genome Biology.

Nature Cancer paper is online

Posted on October 22, 2021October 29, 2021Categories paperLeave a comment

Collaborating with Eddy Yang’s group, a paper is accepted in Nature Cancer, “RNF2 ablation reprograms the tumor-immune microenvironment and stimulates durable NK and CD4+ T-cell-dependent antitumor immunity”.

Welcome Oliver

Posted on October 19, 2021October 29, 2021Categories peopleLeave a comment

Welcome master student Oliver Tan from the Computer Science department to join the lab. 

Welcome Guy

Posted on October 18, 2021October 29, 2021Categories peopleLeave a comment

Welcome GBS/GGB theme student Guy Twa to rotate in the lab. 

Welcome Yuwei

Posted on October 18, 2021October 29, 2021Categories peopleLeave a comment

Welcome GBS/GGB theme student Yuwei Song to rotate in the lab. 

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Making sense of biology using Bioinformatics!